PepCrawler
A fast RRT-based algorithm for high-resolution refinement and binding-affinity estimation of peptide inhibitors.
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Welcome to PepCrawler webserver.
Link to the PepCrawler paper: Here.
For information on how to use this server see Help.

Input file is: protein-protein (perform peptide derivation)     protein-peptide
Upload complex PDB file:
Receptor chain(s):
(e.g. AB)
Ligand chain:
(e.g. C)
Energy parameters: default     enzyme-inhibitor
RRT run type: full     restricted
Your e-mail address:
PepCrawler's solutions will be sent to this address.

If you use this program, please cite:
E. Donsky and H. J. Wolfson. PepCrawler: a fast RRT-based algorithm for high-resolution refinement and binding affinity estimation of peptide inhibitors Bioinformatics 2011; 27(20):2836 - 2842.