Prediction of Complexes with C
n
Symmetry by Geometry Based Docking
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PatchDock
- An Algorithm for Rigid Unbound Docking of Molecules
Unit Molecule:
the asymmetric unit of the multimer complex (PDB format)
Type the PDB code
(PDB-code:chain Id, e.g. 1f23:A)
or
upload a file
Symmetry Order:
(any number from 2 to 20: 3 for trimer, 4 for tetramer etc.)
e-mail address
(the results are sent to this address)
Binding Site:
binding site file (optional)
Distance Constraints:
distance constraints file (optional)
NEW!
Distance constraints are now supported!
Beta 1.0 Version
Contact:
ppdock@tau.ac.il
If you use this program, please cite:
1.
Schneidman-Duhovny D, Inbar Y, Nussinov R, Wolfson HJ. PatchDock and SymmDock: servers for rigid and symmetric docking. NAR, 33: W363-W367, 2005. [
Abstract
] [
FREE Full Text
]
2.
Schneidman-Duhovny D, Inbar Y, Nussinov R, Wolfson HJ. Geometry based flexible and symmetric protein docking. Proteins, 60: 224-231, 2005. [
Abstract
]
