DynProg

[ Lib_General64 | Source | Keywords | Summary | Ancestors | All Members | Descendants ]

Quick Index

KEYWORD

AUTHORS

CHANGES LOG

GOALS

USAGE

Class Summary

Back to the top of DynProg

KEYWORD

Back to the top of DynProg

AUTHORS

Back to the top of DynProg

CHANGES LOG

Back to the top of DynProg

GOALS

Back to the top of DynProg

USAGE

Back to the top of DynProg

DynProg(int i_iN,int i_iM);

relation matrix is filled with zeros, O(n^2)

  DynProg(int i_iN,int i_iM);

Back to the top of DynProg

void setRelation(int i_iI,int i_iJ,int i_iRelation) ;

  inline void setRelation(int i_iI,int i_iJ,int i_iRelation)                                                        
;

Function is currently defined inline.

Back to the top of DynProg

float getBestScore();

O(n^2)

  float getBestScore();

Back to the top of DynProg

void getBestAlignment(vector< pair< int,int> >& o_vPair, float& o_fMaxScore);

O(n^2)

  void getBestAlignment(vector< pair< int,int> >& o_vPair,
                        float& o_fMaxScore);

Back to the top of DynProg

enum DIRECTION ;

  enum DIRECTION {LEFT,TOP,DIAGONAL,NONE};

Back to the top of DynProg

struct MElement ;

  struct MElement{
////
    float m_fScore;
////
    DIRECTION m_Direction;
  };

Back to the top of DynProg

const int m_fGapPenalty=-1;

  static const int m_fGapPenalty=-1;

Back to the top of DynProg

const int m_fStartGapPenalty=-3;

  static const int m_fStartGapPenalty=-3;

Back to the top of DynProg

All Members

Back to the top of DynProg

Ancestors

Back to the top of DynProg

Descendants

Back to the top of DynProg