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Copyright: SAMBA group, Tel-Aviv Univ. Israel, 2004.

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AUTHORS

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CHANGES LOG

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GOALS

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USAGE

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void output(const vector< const FeaturedMolecule*>& ligandMolecules, const vector< vector< const MultipleResultCluster*> >& clusteredMultiResults, const vector< vector< const MultipleResult*> >& clusterRepresentatives, const string outputFileNamePrefix );

  static void output(const vector< const FeaturedMolecule*>& ligandMolecules,
		     const vector< vector< const MultipleResultCluster*> >& clusteredMultiResults,
		     const vector< vector< const MultipleResult*> >& clusterRepresentatives,
		     const string outputFileNamePrefix = "index");

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void outputScreenResults(const vector< const MultipleResult*>& multipleResults, ofstream& outputStream, const string& prefix );

  static void outputScreenResults(const vector< const MultipleResult*>& multipleResults, ofstream& outputStream, const string& prefix="db_");

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void outputHeader(ofstream& output);

  static void outputHeader(ofstream& output);

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void outputFooter(ofstream& output);

  static void outputFooter(ofstream& output);

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void outputFeatureSetAttributes(const FeaturedMolecule::FeatureSetAttributes& attributes, ofstream& outputStream);

  static void outputFeatureSetAttributes(const FeaturedMolecule::FeatureSetAttributes& attributes, ofstream& outputStream);

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void outputMultipleResultSummary(const MultipleResult& multipleResult, ofstream& output, const string& jmolFileName, bool outputNumOfMols);

  static void outputMultipleResultSummary(const MultipleResult& multipleResult, ofstream& output,
					  const string& jmolFileName, bool outputNumOfMols);

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void outputMultipleResultClusterSummary(const MultipleResultCluster& mResCluster, ofstream& output, const string& jmolFileName, bool outputNumOfMols);

  static void outputMultipleResultClusterSummary(const MultipleResultCluster& mResCluster, ofstream& output,
						 const string& jmolFileName,  bool outputNumOfMols);

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void outputSummaryTable(const vector< vector< const MultipleResultCluster*> >& clusteredMultiResults, ofstream& output);

  static void outputSummaryTable(const vector< vector< const MultipleResultCluster*> >& clusteredMultiResults, ofstream& output);

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void outputSummaryTableByScores(const vector< vector< const MultipleResultCluster*> >& clusteredMultiResults, ofstream& outputStream);

  static void outputSummaryTableByScores(const vector< vector< const MultipleResultCluster*> >& clusteredMultiResults, ofstream& outputStream);

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void outputPairwiseSummaryTable(const vector< const MultipleResult*>& pairwiseResults, const string filename);

  static void outputPairwiseSummaryTable(const vector< const MultipleResult*>& pairwiseResults, const string filename);

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void outputInputData(const vector< const FeaturedMolecule*>& ligandMolecules, ofstream& output);

  static void outputInputData(const vector< const FeaturedMolecule*>& ligandMolecules, ofstream& output);

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void outputTableHeader(ofstream& output, bool outputNumOfMols );

  static void outputTableHeader(ofstream& output, bool outputNumOfMols=false);

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string getPymolFileName(unsigned multipleResultID, unsigned int numOfMolecules) ;

  static string getPymolFileName(unsigned multipleResultID, unsigned int numOfMolecules)                                           ;

Function is currently defined inline.

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string getJmolFileName(unsigned multipleResultID, unsigned int numOfMolecules) ;

  static string getJmolFileName(unsigned multipleResultID, unsigned int numOfMolecules)                                ;

Function is currently defined inline.

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