Staccato

[ Lib_General64 | Source | Keywords | Summary | Ancestors | All Members | Descendants ]

Quick Index

KEYWORD
AUTHORS
CHANGES LOG
GOALS
USAGE

Class Summary

class Staccato
{
public:
typedef SequenceProfile< ProteinSequence,Matrix_only_Selector< ::BLOSUM62>,AminoAcidScore::BLOSUM62> TSequenceProfileFASTA;
typedef SequenceProfile< AtomMolecule,TPSelector,AminoAcidScore::BLOSUM62> TStructureProfile;
TStructureProfile getStrProfile() ;
TSequenceProfileFASTA getStrSeqProfile() ;
Staccato() ;
void runAlg(const vector< AtomMolecule *>& i_vMol, const vector< AtomMolecule *>& vCompleteMolecules, const vector<ProteinSequence*>& vPS)
void projection_only2(const vector< AtomMolecule *>& vMol, const vector< AtomMolecule *>& vCompleteMolecules, const vector<ProteinSequence*>& vPS)
protected:
}; // Staccato

Back to the top of Staccato

KEYWORD

Back to the top of Staccato

AUTHORS

Back to the top of Staccato

CHANGES LOG

Back to the top of Staccato

GOALS

Back to the top of Staccato

USAGE

Back to the top of Staccato

typedef SequenceProfile< ProteinSequence,Matrix_only_Selector< ::BLOSUM62>,AminoAcidScore::BLOSUM62> TSequenceProfileFASTA;

  typedef SequenceProfile< ProteinSequence,Matrix_only_Selector< AminoAcidScore::BLOSUM62>,AminoAcidScore::BLOSUM62> TSequenceProfileFASTA;

Back to the top of Staccato

typedef SequenceProfile< AtomMolecule,TPSelector,AminoAcidScore::BLOSUM62> TStructureProfile;

  typedef SequenceProfile< AtomMolecule,TPSelector,AminoAcidScore::BLOSUM62> TStructureProfile;

Back to the top of Staccato

TStructureProfile getStrProfile() ;

  TStructureProfile getStrProfile()                                            
;

Function is currently defined inline.


Back to the top of Staccato

TSequenceProfileFASTA getStrSeqProfile() ;

  TSequenceProfileFASTA getStrSeqProfile()                                                     
;

Function is currently defined inline.


Back to the top of Staccato

Staccato() ;

  Staccato()  
;

Function is currently defined inline.


Back to the top of Staccato

void runAlg(const vector< AtomMolecule *>& i_vMol, const vector< AtomMolecule *>& vCompleteMolecules, const vector<ProteinSequence*>& vPS)

  void runAlg(const vector< AtomMolecule *>& i_vMol,
	      const vector< AtomMolecule *>& vCompleteMolecules,
	      const vector<ProteinSequence*>& vPS)                                                                                                                                                                                            ;

Back to the top of Staccato

void projection_only2(const vector< AtomMolecule *>& vMol, const vector< AtomMolecule *>& vCompleteMolecules, const vector<ProteinSequence*>& vPS)

  void projection_only2(const vector< AtomMolecule *>& vMol,
		       const vector< AtomMolecule *>& vCompleteMolecules,
		       const vector<ProteinSequence*>& vPS)

Back to the top of Staccato

All Members

public:
typedef SequenceProfile< ProteinSequence,Matrix_only_Selector< ::BLOSUM62>,AminoAcidScore::BLOSUM62> TSequenceProfileFASTA;
typedef SequenceProfile< AtomMolecule,TPSelector,AminoAcidScore::BLOSUM62> TStructureProfile;
TStructureProfile getStrProfile() ;
TSequenceProfileFASTA getStrSeqProfile() ;
void runAlg(const vector< AtomMolecule *>& i_vMol, const vector< AtomMolecule *>& vCompleteMolecules, const vector<ProteinSequence*>& vPS)
void projection_only2(const vector< AtomMolecule *>& vMol, const vector< AtomMolecule *>& vCompleteMolecules, const vector<ProteinSequence*>& vPS)
protected:

Back to the top of Staccato

Ancestors

Class does not inherit from any other class.

Back to the top of Staccato

Descendants

Class is not inherited by any others.

Back to the top of Staccato

Generated from source by the Cocoon utilities on Tue Jan 5 18:47:31 2010 .

Report problems to jkotula@unimax.com